YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CE39231
Protein type:	Globular with Signal Peptide
Type Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAHALREIQA HSILMKNQML RWLSLLLFCP ALLNAEVVSL TSQNFEQTIQ ANELVFVNFY  60
   61 ADWCRFSQML KPIFLEASEK FKDAAPGKIM WASVDADKNN DIATKYHVNK YPTLKLFRNG 120
  121 EAAKREYRSS RSVEALSEFI NKQMEVTVKK FIEKNALQAA HNPEKNTFIG YFHDENSVEY 180
  181 KNLMNVAMFY RDECEFMVGI GDLNFPGEAP AAGQPPKLVF QPSNKAVNPA QIPFSGDFAT 240
  241 YEYLKQWVAD KCVPLVREIT FQNAEELTEE GLPFMILFKK SDDKVSEKIF TDAIVRELPD 300
  301 QRKAINCLVG DGTIFKHPLS HLGKSESDLP VIAIDSFRHM YLFKNFEDVN VPGKLREFVL 360
  361 DLHSGKLHRE FHHGPDPVTG NQAPDTEPPP STFEKLKPAS SRYTILDKTE L

Type	Start	End	Confidence
Signal Peptide	1	35	0.49
N-region	1	26
H-region	27	32
C-region	33	35
Cleavage Site	35	36
Non-Cytoplasmic	36	411	0.99