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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: ECM21
Protein type: Globular with Signal Peptide
Type Confidence: 0.94
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQQRRRSSTI RHALSSLLGG ANVHSPAVLN NTTKGGNNNG NIRSSNTDAQ LLGKKQNKQP  60
   61 PPNARRHSTT AIQGSISDSA TTTPRSSTSD TNRRTSGRLS VDQEPRISGG RYSQIEEDST 120
  121 VLDFDDDHNS SAVVSSDLSS TSLTRLANSK KFNEQFLIEY LTARGLLGPK TVLSNEYLKI 180
  181 SISTSGESVF LPTISSNDDE YLSRLNGLND GTDDAEADFF MDGIDQQEGN TPSLATTAAA 240
  241 TESGGSINEN RDTLLRENNS GDHPGSGSEL NTRSVEIDSS MVSYSIAVIV SVKKPTRFTD 300
  301 MQLELCSRVK VFWNTGVPPT KTFNEEFYNA ASMKWNLNDE NFDLFVPLSI SPDDQMIENN 360
  361 SNDRQMRLFK NIPTEERLYL DKTKTKASLL NAIDVNKTHL YQPGDYVFLV PVVFSNHIPE 420
  421 TIYLPSARVS YRLRLATKAI NRKGFYRQDS NSPQPIVSPD SSSSLSSTTS SLKLTETESA 480
  481 QAHRRISNTL FSKVKNHLHM SSHQLKNEES GEEDIFAEYP IKVIRTPPPV AVSTANKPIY 540
  541 INRVWTDSLS YEISFAQKYV SLNSEVPIKI KLAPICKNVC VKRIHVSITE RVTFVSKGYE 600
  601 YEYDQTDPVA KDPYNPYYLD FASKRRKERS VSLFEIRTKE KGTRALREEI VENSFNDNLL 660
  661 SYSPFDDDSD SKGNPKERLG ITEPIIIETK LKFPKYEDLD KRTAKIIPPY GIDAYTSIPN 720
  721 PEHAVANGPS HRRPSVIGFL SGHKGSKSHE ENEKPVYDPK FHQTIIKSNS GLPVKTHTRL 780
  781 NTPKRGLYLD SLHFSNVYCR HKLEIMLRIS KPDPECPSKL RHYEVLIDTP IFLVSEQCNS 840
  841 GNMELPTYDM ATMEGKGNQV PLSMNSDFFG NTCPPPPTFE EAISVPASPI VSPMGSPNIM 900
  901 ASYDPDLLSI QQLNLSRTTS VSGHPDTSDD AGVPNVNRNS ISNANAMNGS ISNSAFVSGN 960
  961 SGQGVARARA TSVNDRSRFN NLDKLLSTPS PVNRSHNSSP TNGLSQANGT VRIPNATTEN1020
 1021 SKDKQNEFFK KGYTLANVKD DEEQEGIVSS SSADSLLSHG NEPPRYDEIV PLMSDEE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle