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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MDL2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLNGRLPLLR LGICRNMLSR PRLAKLPSIR FRSLVTPSSS QLIPLSRLCL RSPAVGKSLI  60
   61 LQSFRCNSSK TVPETSLPSA SPISKGSARS AHAKEQSKTD DYKDIIRLFM LAKRDWKLLL 120
  121 TAILLLTISC SIGMSIPKVI GIVLDTLKTS SGSDFFDLKI PIFSLPLYEF LSFFTVALLI 180
  181 GCAANFGRFI LLRILSERVV ARLRANVIKK TLHQDAEFFD NHKVGDLISR LGSDAYVVSR 240
  241 SMTQKVSDGV KALICGVVGV GMMCSLSPQL SILLLFFTPP VLFSASVFGK QIRNTSKDLQ 300
  301 EATGQLTRVA EEQLSGIKTV QSFVAEGNEL SRYNVAIRDI FQVGKTAAFT NAKFFTTTSL 360
  361 LGDLSFLTVL AYGSYLVLQS QLSIGDLTAF MLYTEYTGNA VFGLSTFYSE IMQGAGAASR 420
  421 LFELTDRKPS ISPTVGHKYK PDRGVIEFKD VSFSYPTRPS VQIFKNLNFK IAPGSSVCIV 480
  481 GPSGRGKSTI ALLLLRYYNP TTGTITIDNQ DISKLNCKSL RRHIGIVQQE PVLMSGTIRD 540
  541 NITYGLTYTP TKEEIRSVAK QCFCHNFITK FPNTYDTVIG PHGTLLSGGQ KQRIAIARAL 600
  601 IKKPTILILD EATSALDVES EGAINYTFGQ LMKSKSMTIV SIAHRLSTIR RSENVIVLGH 660
  661 DGSVVEMGKF KELYANPTSA LSQLLNEKAA PGPSDQQLQI EKVIEKEDLN ESKEHDDQKK 720
  721 DDNDDNDNNH DNDSNNQSPE TKDNNSDDIE KSVEHLLKDA AKEANPIKIT PQP

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle