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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GR78_PLAFO, cont...
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNQIRPYILL LIVSLLKFIS AVDSNIEGPV IGIDLGTTYS CVGVFKNGRV EILNNELGNR  60
   61 ITPSYVSFVD GERKVGEAAK LEATVHPTQT VFDVKRLIGR KFDDQEVVKD RSLLPYEIVN 120
  121 NQGKPNIKVQ IKDKDTTFAP EQISAMVLEK MKEIAQSFLG KPVKNAVVTV PAYFNDAQRQ 180
  181 ATKDAGTIAG LNIVRIIINQ PTAAALAYAL DKKEETSILV YDLGGGTFDV SILVIDNGVF 240
  241 EVYATAGNTH LGGEDFDQRV MDYFIKMFKK KNNIDLRTDK RAIQKLRKEV EIAKRNLSVV 300
  301 HSTQIEIEDI VEGHNFSETL TRAKFEELND DLFRETLEPV KKVLDDAKYE KSKIDEIVLV 360
  361 GGSTRIPKIQ QIIKEFEFFN GKEPNRGINP DEAVAYGAAI QAGIILGEEL QDVVLLDVTP 420
  421 LTLGIETVGG IMTQLIKRNT VIPTKKSQTF STYQDNQPAV LIQVFEGERA LTKDNHLLGK 480
  481 FELSGIPPAQ RGVPKIEVTF TVDKNGILHV EAEDKGTGKS RGITITNDKG RLSKEQIEKM 540
  541 INDAEKFADE DKNLREKVEA KNKLDNYIQS MKATVEDKDK LADKIEKEDK NTILSAVKDA 600
  601 EDWLNNNSNA DSEALKQKLK DLEAVCQPII VKLYGQPGGP SPQPSGDEDV DSDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle