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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: contaminant_GR78...
Protein type: Globular with Signal Peptide
Type Confidence: 0.57
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFSARKSSVG WLVSSLAVFY VLLAVIMPIA LTGSQSSRVV ARAAEDHEDY GTVIGIDLGT  60
   61 TYSCVAVMKN GKTEILANEQ GNRITPSYVS FTDDERLIGD AAKNQAASNP KNTIFDIKRL 120
  121 IGLQYNDPTV QRDIKHLPYT VVNKGNKPYV EVTVKGEKKE FTPEEVSGMI LGKMKQIAED 180
  181 YLGKKVTHAV VTVPAYFNDA QRQATKDAGA IAGLNILRIV NEPTAAAIAY GLDKTEDEHQ 240
  241 IIVYDLGGGT FDVSLLSIEN GVFEVQATAG DTHLGGEDFD YKLVRHFAQL FQKKHDLDVT 300
  301 KNDKAMAKLK REAEKAKRSL SSQTSTRIEI DSFFNGIDFS ETLTRAKFEE LNLALFKKTL 360
  361 KPVEKVLKDS GLQKEDIDDI VLVGGSTRIP KVQQLLEKFF NGKKASKGIN PDEAVAYGAA 420
  421 VQAGVLSGEE GVEDIVLLDV NALTLGIETT GGVMTPLIKR NTAIPTKKSQ IFSTAVDNQK 480
  481 AVRIQVYEGE RAMVKDNNLL GNFELSDIRA APRGVPQIEV TFALDANGIL TVSATDKDTG 540
  541 KSESITIAND KGRLSQDDID RMVEEAEKYA AEDAKFKAKS EARNTFENFV HYVKNSVNGE 600
  601 LAEIMDEDDK ETVLDNVNES LEWLEDNSDV AEAEDFEEKM ASFKESVEPI LAKASASQGS 660
  661 TSGEGFEDED DDDYFDDEL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle