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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: Contaminant_KERA...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.62
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 SRQFSSGSGY RSGGGFSFGF AGIINYQRRT TSSSTRRSGG GGGRFSSSGG GGGSFGAGGG  60
   61 FGSRSLAGSG GSIASISGAR GGGGGSGFGG GYGGGGFGGG GFGGGGFGGG GIGGGGFGGF 120
  121 GSGGGGFGGG GFGGGGGYGG GYGPVCSPGG IQEVTINQSL LQPLNVEIDP EIQKVKSRER 180
  181 EQIKSLNNQF ASFIDKVRFL EQQNQVLQTK WELLQQVDTS TRTHNLEPYF ESFINNLRRG 240
  241 VDQLKSDQSR LDSELKNMQD MVEDYRNKYE DEINKRTNAE NEFVTIKKDV DGAYMTKVDL 300
  301 QAKLDNLQQE IDFLTALYQA ELSQMQTQIS ETNVILSMDN NRQFDLDSII AEVKAQNEDI 360
  361 AQKSKAEAES LYQSKYEELQ ITAGRHGDSV RNSKIEISEL NRVIQRLRSE IDNVKKQISN 420
  421 LQQSISDAEQ RGENALKDAK NKLNDLEDAL QQAKEDLTRL LRDYQELMNT KLALDLEIAT 480
  481 YRTLLEGEES RMSGECAPNV SVTVSTSHTS ISGGGSRGGG GGGYGSGGSS YGSGGGSYGS 540
  541 GGGGGGGRGS YGSGGGSYGS GGSSYGSGGG GGGHGSYGSG SSSGGYRGGS GGGGGGSSGG 600
  601 RGSGGGSSGG SSGGRGSSSG GVKSSGGSSS VKFVSTTYSG VTR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle