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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: AGC1
Protein type: Transmembrane
Type Confidence: 0.63
Topology Confidence: 0.49
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEQINSNSRK KKQQLEVFKY FASVLTKEDK PISISNGMLD MPTVNSSKLT AGNGKPDTEK  60
   61 LTGELILTYD DFIELISSSK TIYSKFTDHS FNLNQIPKNV FGCIFFAIDE QNKGYLTLND 120
  121 WFYFNNLLEY DNYHLIILYE FFRKFDVENL KAKQKKELGS SSFNLKAADD RIKSINYGNR 180
  181 FLSFDDLLLN LNQFKDTIRL LHESIDDNFV KDNKLLLDWN DFRFLKFYKC YHENEEYLSL 240
  241 NSLVTILQND LKNEKIFIGF DRLAQMDSQG HRLALSKNQL TYLLRLFYSH RVSADIFSSL 300
  301 NLSNTELLKA DNNSIPYNVF KDIFYLFQNF DLLNQIFHKY VTENNLNEQD IREQIVTKND 360
  361 FMTVLNAQYN KVNNIIEFSP SQINLLFSIV ANSKENRRLR KRNQDRDDEL LNDHHYDSDI 420
  421 DFFIHNEYLH GVSRSRKNLE SFNDYYHDLS DGFDQDSGVK KASKASTGLF ESVFGGKKDK 480
  481 ATMRSDLTIE DFMKILNPNY LNDLVHQMEL QKNQNESLYI NYYFYPIFDS LYNFSLGSIA 540
  541 GCIGATVVYP IDFIKTRMQA QRSLAQYKNS IDCLLKIISR EGIKGLYSGL GPQLIGVAPE 600
  601 KAIKLTVNDF MRNRLTDKNG KLSLFPEIIS GASAGACQVI FTNPLEIVKI RLQVQSDYVG 660
  661 ENIQQANETA TQIVKKLGLR GLYNGVAACL MRDVPFSAIY FPTYAHLKKD LFDFDPNDKT 720
  721 KRNRLKTWEL LTAGAIAGMP AAFLTTPFDV IKTRLQIDPR KGETKYNGIF HAIRTILKEE 780
  781 SFRSFFKGGG ARVLRSSPQF GFTLAAYELF KGFIPSPDNK LKSREGRKRF CIDDDAGNEE 840
  841 TVVHSNGELP QQKFYSDDRK HANYYYKSCQ IAKTFIDLDN NFSRFDSSVY KNFQEHLRSI 900
  901 NG

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle