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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: MDL2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.77
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKTYVLLYGK LIMTTMILNT GRFEEWYKVC IIALKEKEIY VPSSPIAMLN GRLPLLRLGI  60
   61 CRNMLSRPRL AKLPSIRFRS LVTPSSSQLI PLSRLCLRSP AVGKSLILQS FRCNSSKTVP 120
  121 ETSLPSASPI SKGSARSAHA KEQSKTDDYK DIIRLFMLAK RDWKLLLTAI LLLTISCSIG 180
  181 MSIPKVIGIV LDTLKTSSGS DFFDLKIPIF SLPLYEFLSF FTVALLIGCA ANFGRFILLR 240
  241 ILSERVVARL RANVIKKTLH QDAEFFDNHK VGDLISRLGS DAYVVSRSMT QKVSDGVKAL 300
  301 ICGVVGVGMM CSLSPQLSIL LLFFTPPVLF SASVFGKQIR NTSKDLQEAT GQLTRVAEEQ 360
  361 LSGIKTVQSF VAEGNELSRY NVAIRDIFQV GKTAAFTNAK FFTTTSLLGD LSFLTVLAYG 420
  421 SYLVLQSQLS IGDLTAFMLY TEYTGNAVFG LSTFYSEIMQ GAGAASRLFE LTDRKPSISP 480
  481 TVGHKYKPDR GVIEFKDVSF SYPTRPSVQI FKNLNFKIAP GSSVCIVGPS GRGKSTIALL 540
  541 LLRYYNPTTG TITIDNQDIS KLNCKSLRRH IGIVQQEPVL MSGTIRDNIT YGLTYTPTKE 600
  601 EIRSVAKQCF CHNFITKFPN TYDTVIGPHG TLLSGGQKQR IAIARALIKK PTILILDEAT 660
  661 SALDVESEGA INYTFGQLMK SKSMTIVSIA HRLSTIRRSE NVIVLGHDGS VVEMGKFKEL 720
  721 YANPTSALSQ LLNEKAAPGP SDQQLQIEKV IEKEDLNESK EHDDQKKDDN DDNDNNHDND 780
  781 SNNQSPETKD NNSDDIEKSV EHLLKDAAKE ANPIKITPQP 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle