YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	KTR6
Protein type:	Globular with Signal Peptide
Type Confidence:	0.55
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHVLLSKKIA RFLLISFVFV LALMVTINHP KTKQMSEQYV TPYLPKSLQP IAKISAEEQR  60
   61 RIQSEQEEAE LKQSLEGEAI RNATVNAIKE KIKSYGGNET TLGFMVPSYI NHRGSPPKAC 120
  121 FVSLITERDS MTQILQSIDE VQVKFNKNFA YPWVFISQGE LDGMKQEMIR QAITDSMNGD 180
  181 PELINIKFAE IPADEWVYPE WIDENKAAES LISLANVPDG DSRAVRYQAR YFAGFFWRHP 240
  241 VLDEFDWYWR VDPGIKLYCD IDHDLFRWMQ DEGKVFGFTL SMSEAKEANE KIWDVTKKFA 300
  301 KDFPKFISEN NFKSFITKKD SEDFNNCEFT SNFEIGNLNF YRSPAYRKFF NYIDEEGGIF 360
  361 YWKWSDSIIH TIGLSMLLPK DKIHFFENIG FHYDKYNNCP LNDDIWNQYN CNCDQGNDFT 420
  421 FRSGSCGGHY FDIMKKDKPE GWDRLP

Type	Start	End	Confidence
Signal Peptide	1	28	0.52
N-region	1	19
H-region	20	25
C-region	26	28
Cleavage Site	28	29
Non-Cytoplasmic	29	446	0.99