YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	MUM3
Protein type:	Transmembrane
Type Confidence:	0.80
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGFVDFFETY MVGSRVQFKQ LDISDWLSLT PRLLILFGYF YLHSFFTAIN QFLQFINTNS  60
   61 FCLRLHLLYD RFWSHVPIIG EYKIRLLSRA LTYSKLKIIP TLDKVLEAIE IWFQLHLVEM 120
  121 TFEKKKNVQI FITEGSDDLN FFKDSKFQTT LMICNHRSVN DYTLINYLFL KSCPTKFYTK 180
  181 WEFLQKLRKG EDLAEWPQLK FLGWGKMFNF PRLDLLKNIF FKDETLALSS NELRDILERQ 240
  241 NNQAITIFPE VNIMSLELSI IQRKLHQDFP FVINFYNLLY PRFKNFTTLM AAFSSIKNIK 300
  301 RKKNRNNIIK EARYLFHREL DKLVHKSMKM ESSKVSDKTT PPMIVDNSYL LTKKEEISSG 360
  361 KPKVVRINPY IYDVTIIYYR VKYTDSGHDH TNGDLRLHKG YQLEQISPTI FEMIQPEMES 420
  421 ENNIKDKDPI VVMVNVKKHQ IQPLLAYNDE SLEKWLENRW IEKDRLIESL QKNIKIETK

Type	Start	End	Confidence
Cytoplasmic	1	28	0.75
Transmembrane Helix	29	49	0.66
Non-Cytoplasmic	50	479	0.98