YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YOR228C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIKLHEVPPE PVDPASLPHD VNAHSPEGDG NPDKRKKIFG IPYPFSRSSC RRFLWNCQKI  60
   61 SVLPMALYFP LHAANTLITP AVSPDSAPDD VLMMVREILP SITTKLLVAG ITLHVSAGVL 120
  121 LRIVNNWNKP RRNRHRHLKI SAEQDLSQDS IGLTGGISGY LFGLYKTFRI PPQVISGYIL 180
  181 VPVLIYHLLI MKWVPNSIST EVDFASIKQL LSSKNRWWKW LGGLVPLAIL LESGVYHIGS 240
  241 GLCRYFGVRK MTSRKKWSTA INLLTLVGFV SLIRLMKEDS TKLGPNQFES IFKKIRLLLH 300
  301 VN

Type	Start	End	Confidence
Cytoplasmic	1	54	0.94
Transmembrane Helix	55	74	0.75
Non-Cytoplasmic	75	101	0.80
Transmembrane Helix	102	124	0.90
Cytoplasmic	125	173	0.69
Transmembrane Helix	174	190	0.91
Non-Cytoplasmic	191	219	0.55
Transmembrane Helix	220	248	0.70
Cytoplasmic	249	256	0.59
Transmembrane Helix	257	276	0.77
Non-Cytoplasmic	277	302	0.50