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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YRR1_YEAST
Protein type: Transmembrane
Type Confidence: 0.70
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRRSDALLG SFQATNVTPP SDNSNSTAGG ANGSNSGTPT STSGKKRNKL IKSCGFCRRR  60
   61 KLRCDQQKPM CSTCISRNLT TCQYAEEFNK NIEKKATYGP YPNADLLKKV EELENKIRIL 120
  121 EAEKNTNSSA SSMYTSPNFP PLGTSVGRGS TETSSPLPDG VINPYADRYY LQSKHSGRST 180
  181 LYGPTSMRTQ IANSNWGFIE KYKQLWAKVK VERNKWKQNN QKTMCRELGL LDESDWQPDP 240
  241 LIKQICRFLP SYNKALSILD DFFNDGACNE INVILDKAKV RRDFLDYFMP EKEVKAEGDR 300
  301 SIVYILSNPK KNYYKAAVIL LILCLKYFHT DVPTPIEKFF TLLKGASTAK VFYIERAQML 360
  361 ILFYYHRETY SFGGDGSDLV NINECLVTTV TTIGLHLNIR ETFKEHEVFM GSIESLENVW 420
  421 LMAIFIDYNI SCNVGRPLLI NKFYLDENQD HCILNSKSKT YEGKLKRYLK LTRPMLLTLY 480
  481 DRDKFPDLKA YSKRIINFVE EELGPLGHYT GENISEEVPL RESRILSMAV GLLLSFYALI 540
  541 HSVLKVRNIE SKNNTFQLVL INFSIIVNTT IRCYRIDKAL YPEKFEASNP HLPPHMALSM 600
  601 SLTAGLFSKT LVFFCSLIYF KLTLFENGLC LSNDMEVGWS DLTKLTVPLD KDLSLGTAMS 660
  661 LYSSIFDRLF TVGNKELIRT MHRSSQFVIE LAIERTYRTI LGNVIEFRKL TEETWLAQIK 720
  721 QELDPQSDNP SSEAKIVSDR QRDLSLAVPT PTPSIIPMLP SPGETKNHAK SQSEIIQMLT 780
  781 DEFWANYNSG WEELINQSEF STLFDDYKDN 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle