YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|190407226
Protein type:	Globular with Signal Peptide
Type Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILLLILFPC IYFLPFCINR TVRSSPEYSA ADYYKSSIQY HKSYSNMPHS VTPSIEQDSL  60
   61 KIAILGAAGG IGQSLSLLLK AQLQYQLKES NRSVTHIHLA LYDVNQEAIN GVTADLSHID 120
  121 TPISVSSHSP AGGIENCLHN ASIVVIPAGV PRKPGMTRDD LFNVNAGIIS QLGDSIAECC 180
  181 DLSKVFVLVI SNPVNSLVPV MVSNILKNHP QSRNSGIERR IMGVTKLDIV RASTFLREIN 240
  241 IESGLTPRVN SMPDVPVIGG HSGETIIPLF SQSNFLSRLN EDQLKYLIHR VQYGGDEVVK 300
  301 AKNGKGSATL SMAHAGYKCV VQFVSLLLGN IEQIHGTYYV PLKDANNFPI APGADQLLPL 360
  361 VDGADYFAIP LTITTKGVSY VDYDIVNRMN DMERNQMLPI CVSQLKKNID KGLEFVASRS 420
  421 ASS

Type	Start	End	Confidence
Signal Peptide	1	24	0.64
N-region	1	15
H-region	16	21
C-region	22	24
Cleavage Site	24	25
Non-Cytoplasmic	25	423	0.99