YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	IZH4
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSLTTIEQS PVKCETTTEK ESNDTRGTDS NENAETKETK KGFPFHDLAK LQKQYKNKSS  60
   61 RNESLVALIY LLGSMLSFCL LIFFTDFYLI PLFPTTTTMT DYIVFNFYLL NVFVFCMVHF 120
  121 IYHFVKNISL QQHLEHWQKF SYLSNINLLI SSQITILYYL FYDYVFFFKI FTLLMNFIGL 180
  181 VAYFFILTDK LISSKRFNKT VFFISVSVVC CSLPLLTAII TFDGLENLKE RIKVNAITWE 240
  241 LVALVAASII YVTRFPESLF RRNKKEEGWN HSEYLFHLLI SGTAFYHFFI LIQSYILMHS 300
  301 SLNQPELINF KS

Type	Start	End	Confidence
Cytoplasmic	1	65	0.99
Transmembrane Helix	66	87	0.93
Non-Cytoplasmic	88	102	0.87
Transmembrane Helix	103	125	0.89
Cytoplasmic	126	140	0.93
Transmembrane Helix	141	161	0.92
Non-Cytoplasmic	162	166	0.80
Transmembrane Helix	167	187	0.93
Cytoplasmic	188	199	0.87
Transmembrane Helix	200	222	0.92
Non-Cytoplasmic	223	235	0.90
Transmembrane Helix	236	255	0.94
Cytoplasmic	256	273	0.96
Transmembrane Helix	274	297	0.90
Non-Cytoplasmic	298	312	0.96