YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YOL047C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.73
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTRPQPDWY YHRHPYASTP LAEGEEPQLL PIQDQGNHKK SKIWMAYKAP IVRWYKNAML  60
   61 VKDNFWKDLE SSHQIIWYPY KGISESVGNS DYLHLFFLIF GYYLLNLLLI VAFTSILAWS 120
  121 LLVCIYLPFL GLFALPLAYM QTILISTTLC NSMVKGTDFV LFTRIYGVTF ARKGLTELSE 180
  181 ACETISFTPF VYRRSHRLGG LFSKRFYLVS LPQFFIFFFW YIFIAFMFLL LLLVPIVGPI 240
  241 TINMLPFSPG MGFYYFEPYF VDVLHLDSRK LSKVYYKGFA KWLLYSISSG LLESIPILGG 300
  301 LFIGTNAVGA SLWIVKEIKD RDQPAVPPSP PAEPEEPTVG SYAPPIQQSI AHINPP

Type	Start	End	Confidence
Cytoplasmic	1	92	0.94
Transmembrane Helix	93	116	0.79
Non-Cytoplasmic	117	117	0.31
Transmembrane Helix	118	145	0.73
Cytoplasmic	146	213	0.87
Transmembrane Helix	214	242	0.82
Non-Cytoplasmic	243	291	0.77
Transmembrane Helix	292	315	0.79
Cytoplasmic	316	356	0.83