YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SIL1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.96
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVRILPIILS ALSSKLVAST ILHSSIHSVP SGGEIISAED LKELEISGNS ICVDNRCYPK  60
   61 IFEPRHDWQP ILPGQELPGG LDIRINMDTG LKEAKLNDEK NVGDNGSHEL IVSSEDMKAS 120
  121 PGDYEFSSDF KEMRNIIDSN PTLSSQDIAR LEDSFDRIME FAHDYKHGYK IITHEFALLA 180
  181 NLSLNENLPL TLRELSTRVI TSCLRNNPPV VEFINESFPN FKSKIMAALS NLNDSNHRSS 240
  241 NILIKRYLSI LNELPVTSED LPIYSTVVLQ NVYERNNKDK QLQIKVLELI SKILKADMYE 300
  301 NDDTNLILFK RNAENWSSNL QEWANEFQEM VQNKSIDELH TRTFFDTLYN LKKIFKSDIT 360
  361 INKGFLNWLA QQCKARQSNL DNGLQERDTE QDSFDKKLID SRHLIFGNPM AHRIKNFRDE 420
  421 L

Type	Start	End	Confidence
Signal Peptide	1	19	0.94
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	421	0.99