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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: DSE4
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLYLTLLFL LSFVECSYIS FISNNADEIL ETDLIETLSY ATLTVGEPYV AQSVVVTRVS  60
   61 AASHSPLSVS PKNRVSASPI NSQDSDSNTR TAVQLSLSLS NYASQVSQKI SAQTNNDPVT 120
  121 VSNIYANDNS KSKSSVHNLS SVSGVASVMP SASTMRKVTT LLSQTASTST STLFSSSLSI 180
  181 SGTQLNGTLL TSVSKGTIDP LVTQMPSYSS QETKIIPSSL TSNKTIYTIS VRTNAATATG 240
  241 EDSFIASTPA SSTLFYPSNS TQDLVQTLAS TTASPAYPSN RTQITLSPSV SLYSTTSPIY 300
  301 PSNITENGSS PSPSLSSTVS PVYPSSSTGN ILLSSLFSTV DSSSSPVSST LDTIYVSSSM 360
  361 QATISSSSSS RQTKTSSSSL STSTSSTATT TENSSTTTIV NLFNAVSTDE PPTVFDRSPN 420
  421 PMSLADGVSN DGPIQTNKFY TNLIVGSQES PAFVYPYSLW KYTSSSYGFA VQHTTVDQYS 480
  481 YGGYDSSGNA EYLVNPLGIA HVVFSASNFD SSMTMQVDEM TLSSTRVVLS ESNDSSNYLE 540
  541 IPLVQGMGFA TGIYHGSLNA KIGSSVGFNT IVSESSSNLA QGILKYRITL LNGVTWLCYV 600
  601 IGPDDLTSTD FSLEVSSEYE IKASASVDGL IIQLAVAPSE TDYEVFYDQA AGMYVTNFKL 660
  661 QGVSDGSTAT YEFSYTTQGE SASGSTMIFA LPHHESSFSD IMQDYYTGIQ LASTTKGVMN 720
  721 GYLTTSLQFS TSLNRQISWL PWSSQLGSNL LEYSKEQLQL LAEVANSELQ VSISESISGL 780
  781 NTYYLGKVID KYSYILLTVS EIIQDEASTK STLENIKSAF DILLQNEQTY PLIYDTKFNG 840
  841 LVSSGDWGST STQYDFGNTY YNDHHFHYGY IIHAAAVIGY VDSKLNGTWA ADNKDWVNSL 900
  901 VRDVANPSEK DEYFAQSRMF DWFNGHSWAA GLYENGNGKN EESSSEDYNF AYAMKLWGAT 960
  961 IGDQSMELRG DLMISIMKDA MNDYFYYQND NTVEPEEIIG NKVSGILFDN IIDYTTYFGT1020
 1021 NTEYIHGIHM LPITPVSSNI RSETFVEEEW QTKIEPIIES IESGWTGILK LNQALFDPVD1080
 1081 SYAFFSDSTF DSSTYLDNGM SRTWALAFSG GLANSIA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle