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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: PRM1
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFKCYLQL GDRLSQIWLN KYTLVLLLAM LKLLFFSKSI QHAIEVSETY ILSNCYSIDS  60
   61 LYSKMTDNTP HYLGIMGNYL IEKGMEETVK ATLETLSLIV YASEGLVNFA IDLYLGTYAC 120
  121 LIVSAVDGTV DVATNITEKL ISLVNDTVSS VANELDTGLN DISKIINKVI KAASKVENFF 180
  181 TGDDDDSNMT SSIKSVNLTI SALHNLYIPS SINDKLEELS AKTPDFAQVK NTTKNLISVP 240
  241 FNEVRKNIKA VNASNIIGDT SVLYVPPVSL DNSTGICSSN QSEILAFYSI LGHVLKIATV 300
  301 VCITVLICFA VGAMAPVAWN EIKLWRRLCG MRDHYMLSRQ DSYTSFSSEN THELKDPFRD 360
  361 PPIQNGQYDV IASYQQCFQT WNTRIAGWMT NLVTFGKSPE NIDPKTKQKI EWVVAYMTSE 420
  421 RALCVLGIGL LGILVCICQF VMIALLKHKI SHSLTSNDGD GVQNLLKSST AVDIENQMSL 480
  481 WSVQTNKYIN TTETNINQEV FGWINTTTLS VNNTVATMIS DIDTTLADVF NGTLLYNPMK 540
  541 TVVGCAIENK LYTIEKAMTW IHDKAQLHIP RINGTQIKQA LAKQTDNSTI PTASSTSAAT 600
  601 ENLLENLVND MREGLLKILR AYHRITLGEL TVALVILAVW LVQLPIALVI LRLRLRKATF 660
  661 D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle