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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SIP3
Protein type: Transmembrane
Type Confidence: 0.93
Topology Confidence: 0.69
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSVHGRDPKK RQLRLISVAF KEASIDSPSF RASVNFFQTR VDALEDWIEK TVDFFDQKYK  60
   61 VSFEDFRRAK ETLLSQLLPP PALLSNGFVS NQSFTPRLID SFNKDYYDFS MKLLQIVKGD 120
  121 DSSHSTALLE LMTTAIEPYR NVRKNFDFYQ GKYDSMLASY QAIRISKTSL EPSSIKSDAL 180
  181 QLFEVQKNYL KASLDLISAI SAVKLSLDKF ILESMKVLKS RSIFITKDSG RKIDLSPCIN 240
  241 EYLDNYAIWV ENSIEGSKVL DSDISNAKKQ AYRYTLKRIT PSSDTSDYNI RSIHSSKLLS 300
  301 KDTQVPPKSP EKSGWLYMKT QVGKPTREIW VRRWCFLKNA VFGMFLLSPS KTYVEETDKF 360
  361 GVFLTNVRYD PEEDRKFCFE VKIFGNKVTE AHDNMSKDIT LVFQTSNYLD LKSWLIAFEA 420
  421 TKKYVMSIQH DSLEYELAFK RFSPKFFEFA SSTTTSIDQL ITTFDKETES LYETLNCSIS 480
  481 EYDILTLGEE KVFQFQMPTT PISTKMTQLA ILSNFLTKGS WFPNAVLANI WGTTDWSEYT 540
  541 ILPGKGKKPS SLLTIDGKRL PIRNSTIYPQ YYSNELKVLD LQFKSLVFSP DQRLEKLPEE 600
  601 LLLFKFEALW CPNKKQKFSA TCFCTKDYIY CYMNSMEFIC LTKISLSEIV SVEADRSSKK 660
  661 TLKLYDASGL QMKAIVLFSD YKLIASKLQY LLENKAIKNP NSNEEILVKF EQMEKESQEK 720
  721 KQEELYKIEQ ENSFDRKATS VSKIIKSRVT FWEMSDDAST LLNRLKKLQT EYSITYNHEY 780
  781 EISSKGLAHI LFGDKSNAFP KCLFLARKDG EEHGKRFWYK NKDINGKSQL VRKIPFRLDM 840
  841 TGNFLNTGKY HRDKESKMIF ATQRIVKIVD NKYYEVDLDP FFVKVPFCHL LKLSIKFVIT 900
  901 ESYDVDNHLE IKLNMTASSS SLHVLYKLEY IDSRTGKTIE KLSLAEIICQ TWALKFAHSE 960
  961 FLLIRRVLRY YLEKIGKHGK VIKAIKLCGI LGVLSNKSEE PATEKNGNSK ESESMQYDIR1020
 1021 YSCTILFLVF IKLMVYRVTN LTFVFFRILI GILLLCAEKF SRINRMMVVG LLASIMINIL1080
 1081 LSEKASVPYW SIKRAEKLFH DRLGSDKFTM QRAIYISDSD LLSSQLSVPS NNPIFEKFSE1140
 1141 DNFNKDYQYS ETRKQLAMRR NELLIELRIL QDMEKQLVHD DYEKFLLEEV NKCSMVSIEM1200
 1201 TDLWFNDTQL QNYCSICNEE LEKLRPPIT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle