YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNL203C
Protein type:	Transmembrane
Type Confidence:	0.83
Topology Confidence:	0.62
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPFDFFNSF KHALAVLKLP SKSMSTTDLK AFGERFAKSH TKFPAAPAMT KSILPNFSTV  60
   61 FLTAFSTCSK LRTSTFAIAK TASLSFANCE IPFAACSVLS WSLPTIAALQ PRRTKASVCT 120
  121 RHIVPAPPVT NATLPLNKSG LQEPSVTNLP SKVFAVFIVS MTRTYDLPNS KSVNIRNYEL 180
  181 LFKFRFSLIW SLTLIPILFG KLQ

Type	Start	End	Confidence
Cytoplasmic	1	180	0.62
Transmembrane Helix	181	200	0.72
Non-Cytoplasmic	201	203	0.77