YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNL181W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPLNIIGTAL LDGTDKIPYY QTIKKVAPYV LATGAIKYWS RGPSNTWERK LHGKVYLVTG  60
   61 ATSQGMGTSV AYKMAELGAQ LIILTREVDE WVTEWCEELR EKTKNELIFV EKCDLSNLWE 120
  121 IRKFATSWLD NSPPRRLDGV IVMSGDMEPW GIPKISLPQR RSSKDGLELQ IATNYVAIFH 180
  181 LLNLLQPSFK AQPPDRDVRI ILATCWLQVV GDINIEDPLW QNAKYKSALK FFASSKLQLG 240
  241 LSMMELQRRL TEDIKNQKTN GPERTGKNVT ITMVQPGTMR SNSLRRVISN GSVVLLIILY 300
  301 CILLYPILWL FTKSGRRGDQ SFLYALMTPE LEEVNLKDTK VKYISDCSIV KFARKEFDDE 360
  361 ELQKKLFDNT ERDILQLEKK VAAKRNANKT GNQNSKKKSQ NKSRKDD

Type	Start	End	Confidence
Non-Cytoplasmic	1	287	0.63
Transmembrane Helix	288	311	0.88
Cytoplasmic	312	407	0.61