YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YNL095C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.61
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Cytoplasmic	1	16	0.70
Transmembrane Helix	17	36	0.90
Non-Cytoplasmic	37	42	0.55
Transmembrane Helix	43	63	0.71
Cytoplasmic	64	71	0.55
Transmembrane Helix	72	94	0.92
Non-Cytoplasmic	95	141	0.51
Transmembrane Helix	142	163	0.90
Cytoplasmic	164	454	0.75
Transmembrane Helix	455	480	0.76
Non-Cytoplasmic	481	503	0.73
Transmembrane Helix	504	525	0.90
Cytoplasmic	526	535	0.66
Transmembrane Helix	536	558	0.77
Non-Cytoplasmic	559	574	0.62
Transmembrane Helix	575	597	0.91
Cytoplasmic	598	612	0.59
Transmembrane Helix	613	636	0.85
Non-Cytoplasmic	637	642	0.61

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVHITLGQAI WVSVKPIIKI YLIIGVGFLM AKMGILTVEA TRIISDIVLT VLLPSLSFNK  60
   61 IVANIEDKDI KSVGIICLSA LLIFGSGFFF AYVVRLFLPV PKQWYGGILA GGMFPNISDL 120
  121 PIAYLQSMDQ GLVFSEEEGN KGVANVIIFL TMFLICIFNL GGFRLIESDF EYNDDESAVR 180
  181 VSETTKTQPA VSANTTNTDT SERFFSNEQQ LFNNKYTARD SLTEAIGTKG ENADVPPISR 240
  241 RSTNSIAPLS LPDTSSNSKI TKPVQVKARN TIACTQSEES QATRGSNPLD SQSSASTIHS 300
  301 YNTSESYESS IDTMRARRTA SQPRAYNTTT LLEENCLDEK CPKNMSMAAL EPIRSIDMRA 360
  361 LPSQNIHHLI REYSNVDQYG HQRRNSSLRG ADMNDVHSIS SNSTLQTIKT ANLTRILTSD 420
  421 ATVSKKDIET SGESLPQWMR KFSLTPLLVF FLKNCLRPCS MAVIIALTVA FIPWVKALFV 480
  481 TTANTPHISQ APDNAPPLSF FMDFTGYVGA ACVPFGLILL GATLGRLKIG NLYPGFWKAA 540
  541 VTLVILRQCV MPIFGVLWCD RLVKAGWVNW QDDRMLLFVI AISWNLPTMT TLIYFTASFT 600
  601 PPETTAPIQM ECVSFFLMLQ YPLMVVSLPF LVSYFLKVQM NL