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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: TCB2
Protein type: Transmembrane
Type Confidence: 0.87
Topology Confidence: 0.59
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSPNSSKTRT DQISSMPGIN EATKVESKNV VKDAVPIKSE VETNGTSIVR EKQDPSYVGW  60
   61 KQVGGWEEKD ELTSEDLLVD VNKDTFLGNL LPDKFYGDWY HEVAILIIAG LCSFVLGYFK 120
  121 FSLASVLIVM LTTGMLYRTS SKKYRESLRD LAQKEQTVEK ITSDYESVEW LNTFLDKYWP 180
  181 IIEPSVSQQI VDGTNTALSE NVAIPKFIKA IWLDQFTLGV KPPRIDAIKT FQNTKSDVVV 240
  241 MDVCLSFTPH DMSDLDAKQC RNYVNSNVVL KAKIFGMDIP VSVADIFFQV FVRFRFQLMT 300
  301 TLPLVETINI QLLEVPEVDF ISRLLGNSVF NWEILAIPGL MRLIQKMAFK YLSPVLLPPF 360
  361 SLQLNIPQLL SKTGLPIGVL EIKVKNAHGL RKLVGMIKKT VDPYLTFELS GKIVGKTKVF 420
  421 KNSANPVWNE SIYILLQSFT DPLTIAVYDK RETLSDKKMG TVIFNLNKLH ANHYHKNEKV 480
  481 HFLRNSKPVG ELTFDLRFFP TIEPKKLLNG DEEPLPDMNT GITKITIREL KGLDELSDKK 540
  541 FVFAELYVNA ELVMTTKKEK RTAHLKWNSD YYSVVTDRRK TICRFVLKDQ SGKVISSSVQ 600
  601 PLNHLIDRTE VNKEWIPLRN GKGELKVTTY WRPVDIDLGL KSVGYTTPIG MLRVFINKAE 660
  661 NLRNPDSLGK ISPYAKVSVN GVARGRTNER IETLNPIWNQ SIYVSVTSPL QKVSIDCFGI 720
  721 DTNGDDHNLG SLNIQTQNIY HKDNDDKYTI FIDNAPRTGN LIGKKGVKGT VTYYLSFYPV 780
  781 VPVLSLEEAK EVDEINEKKD KLEKQKSTLD DKNISKEEKE RIKKEEFRLT EKYDMYSYKM 840
  841 KLDLDELLQY NAGVLGVTVL GGELPQPGLY VQTFFDSCGY AAITSAKNAI RTIKTGWSGD 900
  901 FMIKELEWSV TTFRVTKTKD ANKAENFICE VNIPTIELVR NCYYKPSVLN LIGKKSAKLL 960
  961 VQVSWFPVTA TELPQSDLIT NSGDLKITAK SAENLIGVNK NGYSDPYVEF FLNEKSTSPF1020
 1021 FKTAVQKKTL NPTWNESKTI EVSNRVNDYL TINVKDYEST NSNRSIGKAV VPLSTIDPES1080
 1081 DTTFNIPLVG PKGEDGGVLH LEFEFEPRYT TNVVKREAGL GNFATKGLGT GIKAGSTVFA1140
 1141 LGTNVVSTGL GTIDKVKAGV FGGKKSTTTG DKKSEEKQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle