YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YMR290W-A
Protein type:	Transmembrane
Type Confidence:	0.94
Topology Confidence:	0.49
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAFKVGCDNF SSSNFSTQVV CSPSGAALFC FEVLFSSTTG SSVDSESLER LFDGVAILLL  60
   61 LILLSLSNYY SIQLSNSYVL KYRVYTIKSH LIAKANIEKK KKKKRKRQIK NFQFG

Type	Start	End	Confidence
Cytoplasmic	1	18	0.56
Transmembrane Helix	19	36	0.65
Non-Cytoplasmic	37	50	0.48
Transmembrane Helix	51	72	0.82
Cytoplasmic	73	115	0.49