YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DFG5
Protein type:	Transmembrane with Signal Peptide
Type Confidence:	0.82
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIVNISAKMI LSICFTFLSF FKATHAMDLD TTSKTSICDA TALIQGGMLD YYEGTRYGGT  60
   61 VGMFQSPYYW WHAGEAFGGM LENWFLCEND TYQELLYDAL LAQTGSNYDY IPSNQTMVEG 120
  121 NDDQGIWGIT VMGAVERNFT DPGDGKPGWL AMVQAVFNTM YSRWDSEHCG GGLRWQIFTW 180
  181 NSGYNYKNTV SNACLFQIAA RLGRYTGNTT YLEVAEQVFD WLVDVGYVVL NDTANVFDGA 240
  241 EIDTNCTDIT KIEWTYNHGI VLGGLAYMYN ATNGTGEWET SLTKILNGAK SYFFKDSIMY 300
  301 ESACQDYGTC NTDQRTFKSI FSRMLGLTSV MAPFTRDTID DLIKTSAEAA AKSCNGGTDG 360
  361 HTCGLNWQKQ TNDGYYGLGE QMSALEVIQN LLIHDRPAPY KEDNGGTSKG DANAGMNSST 420
  421 TNVLQNNLNI KKGDRAGAAI ITAVILSVLT GGAVWMLF

Type	Start	End	Confidence
Signal Peptide	1	26	0.96
N-region	1	17
H-region	18	23
C-region	24	26
Cleavage Site	26	27
Non-Cytoplasmic	27	435	0.96
Transmembrane Helix	436	457	0.81
Cytoplasmic	458	458	0.80