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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: SOV1
Protein type: Globular with Signal Peptide
Type Confidence: 0.58
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKYNRSLCS SALIAKSQIR FYRLKRAPLN YASHIPEVLN KTIIGPDEPE KCLILKGKTS  60
   61 EEIENNLLSN KKFQEINPLD TIQETFIQYL KFCNETNFKR SNKNLNRLKK TLESKDSNST 120
  121 VKINAVFNYL LEECDLEIKR LNTTGQTQVY NEEKGNEDDL EQSIMNDIFR SAQEQFEDQE 180
  181 GHIPLRSTSF LLEILKSFNE RFNGIIKPKE SITEMVTFSQ LAQAFEVVKL IPVQEMKEKG 240
  241 IYLVGNLLYG TGKVRLDPIN ESFYIESLLV FGNYKAAYSL FITNKDKVNE RWWNELGLMI 300
  301 TLRSNHLRNF RKLLAETDAK YSTKYSYLSP RVTKLSIRKY LSIGNVTEAN ILTDRFIKLV 360
  361 EEVGIIRMKD EQEELPTGVK NFQNEKHATE FLNELEIPSD HDYISIVDFH LYKRNIPMAA 420
  421 QLISKYMEIP GTTQEDAAFL LVKTKLNMLK DFEKLRNIFA QNKDYVVPEN NVKMLQEAFE 480
  481 SVITKYNTNS PIYNELLFEN VSALTKSIVL TDFLEEFITK QASGQWMELN SVSRSRKFNG 540
  541 LLNILLGTGE EEKAYNILKK LEEASKKSKT DPDLLYNQFY SEVNAYHYAK FVEFYSLQIQ 600
  601 NMKAQNTPSF RKKEFKQKVK SLLKRMQESE VIPNAVFLRE ILNFYDSMYD FNSSFEIINP 660
  661 LLESKQQVSS ESSLSTSNPC RFYNRRIITK PLYHKIWSVY CHYYHVLQNN SRILSKKSSI 720
  721 VKKLIKRQIK IHPTCHPRVL FQMTAENGEI LPDKTFSKLI VSTFMKSGDL EAIPAILTFL 780
  781 TKKFDLNIDY DLSMYILKGL KRQYLRDISN ISKDACEYKL RKAELMNNES ILKNIPQGTN 840
  841 QENTISHLIR EILIFIKWKE KSDCSTFLMV EDAFKELGTE FTLLEELIED VNKLKIKA

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle