YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ORM2
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIDRTKNESP AFEESPLTPN VSNLKPFPSQ SNKISTPVTD HRRRRSSSVI SHVEQETFED  60
   61 ENDQQMLPNM NATWVDQRGA WLIHIVVIVL LRLFYSLFGS TPKWTWTLTN MTYIIGFYIM 120
  121 FHLVKGTPFD FNGGAYDNLT MWEQINDETL YTPTRKFLLI VPIVLFLISN QYYRNDMTLF 180
  181 LSNLAVTVLI GVVPKLGITH RLRISIPGIT GRAQIS

Type	Start	End	Confidence
Cytoplasmic	1	79	0.61
Transmembrane Helix	80	99	0.88
Non-Cytoplasmic	100	103	0.51
Transmembrane Helix	104	124	0.78
Cytoplasmic	125	151	0.47
Transmembrane Helix	152	172	0.54
Non-Cytoplasmic	173	178	0.64
Transmembrane Helix	179	199	0.89
Cytoplasmic	200	216	0.82