YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	OPI9
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFESRPIVG VGGGGGACGG LLTCVGRDAE GKGGADTLGR EILELFLWWL LCAGLTEGIC  60
   61 GLFCGTFGAE APDNGSGGAG DDGTMGIGGA AEDGISGIGG AEDEGILGTA GAGDNGALGM 120
  121 GGAATDGTAP GIGGALADGE GLVLALLLIC FNFGIPPAKI SPNCGAPIPG IGGADIEGPL 180
  181 LLTVPELPEA DETTPPPTIG ALLSLVSAFF SFIPFLMSPN RASRPCITDF AGLGALPPNA 240
  241 GGGGGGGGAG APAISTIRYI YGRLLQQTVV RFLVVCFVSY QKLSS

Type	Start	End	Confidence
Non-Cytoplasmic	1	6	0.75
Transmembrane Helix	7	26	0.80
Cytoplasmic	27	45	0.90
Transmembrane Helix	46	69	0.93
Non-Cytoplasmic	70	130	0.87
Transmembrane Helix	131	155	0.75
Cytoplasmic	156	196	0.45
Transmembrane Helix	197	218	0.87
Non-Cytoplasmic	219	234	0.36
Transmembrane Helix	235	261	0.55
Cytoplasmic	262	285	0.54