YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR312C
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.60
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEDDHWNL VRLRRLRKGR EGEEQSSKSE ISLDSLHESS FAGEDDEDFD ADVLSNTSSE  60
   61 ESAQMNRIYD FRTSNEFSNA GVNIDQTGVP TISESFDTLS GSNVGGTVLP SMEGSKLKDS 120
  121 TIRNSSTLSD HIIDKSEGKS AKLKMWHVIM LSSLLSMTFS YLALEYSLTG DVLAGFKSQQ 180
  181 SLRNNERKLL YGNIDFVDKK SYDSSSDSLS QWAPSGKYYV DFDNHIAYPL KDDDLMGWRR 240
  241 YKTDLVILWY TTKARMKDGW HKRINKINGG RIKLHLFLKN SFKSAQESLR VLHKEQKRRW 300
  301 KRLFVLLHNK YRQFSPHIKR YFDHSCQKAK QCWSGSRLQL RKLRFKSMKP FRVFQFKVRK 360
  361 DTNWFVKQLK RFGLKLQHSR MYKAMSECRK KNYFKCKH

Type	Start	End	Confidence
Cytoplasmic	1	144	0.64
Transmembrane Helix	145	164	0.60
Non-Cytoplasmic	165	398	0.99