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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IOC2
Protein type: Globular with Signal Peptide
Type Confidence: 0.93
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTKRTRGTR NVGASMPAGA ANADSEDWKE YVSEDIIAQL NKHQLPYSEI LDEKIADLAN  60
   61 HWHFQYVMAW LSNVCESYTT TTFNTDQYGG SSTKCLWKNI KFDEGVFVTD VFSKIDGKDS 120
  121 NYYNDEVDVD EGSQNLYDRI RLQLLHQLAG NKSGQLKDWN VIVNHHLQNS SAYSDLVTDL 180
  181 PFLELEIARQ FDIIYSIIKL IEMKNMIFKN YLANNLHLFT FSEVILDDDN SGGEEMKSLF 240
  241 ALPNVGVLVK KTIHRVKEGS SSQVSQTLNI PIKLQNCTIK ESDPDIPDSV ELIHLEYSHD 300
  301 IDAYLQSITI DYDVITTNWG SMLEYWSENK SSKAIDEFIT NLIPVYAEHR LYSAKLLANR 360
  361 EKERAIAELM TRRKRSSRLV AKEEENKKKD LESEWFEKLD EREQFIRHRN KLVSKEIKKI 420
  421 KDLLWNQLWQ LYDQDYRDEK LTRRNELKDR SGSGTPFFET SLGREEDNPL NEIDIGVLDH 480
  481 GPNFQSSIIP VEPPIPGTVG PLQTGDVPEL PSDFCITKEE LDELANYGIF TPQQEPDNQD 540
  541 SVFQCPGEPE LAPMIITEDT ETDLFNNRPL ICCDHCYRWQ HWECQPPKII ELISSTTKSP 600
  601 QHTLSQRDFG VIIMGNSHGN RRSSRRPQST LEPSTKSSRP TDKRKPLSEC STFICAWCIR 660
  661 DLELELRNIF VPELKIIRAK QRKQQEDRER RKKMKEEKKR LEELAKKREL TESVSPPVFN 720
  721 NAFANMSSST TPSIAAYEKT NPAINPAPNV NAAHPIITYS QQTGSKTVPQ APQAPQTSQA 780
  781 SIQPQQQQQQ QQQQQPLHPK EQNFHFQFPP TN

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle