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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: RAX2
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.85
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFVHRLWTLA FPFLVEISKA SQLENIKSLL DIEDNVLPNL NISQNNSNAV QILGGVDALS  60
   61 FYEYTGQQNF TKEIGPETSS HGLVYYSNNT YIQLEDASDD TRIDKITPFG VDSFILSGSG 120
  121 TINNISVGNQ ILYNLSTLSM TPIFNQSLGA VQAVLADNSS IYFGGNFSYN NGSMTGYSAL 180
  181 IWDSISNTTQ LLPFGGFGEN SSVNSIVKLN NDNILFAGQF YTLDDPSALI SSSNNGTNST 240
  241 SSLNATTLEL GQRIPLRYAS WDSQGSTTFA SDSLVCPNTN EDAWLYPDTS GSLVCNLPYE 300
  301 VSPTKIRLYN SQRSDSEISV FQILTDPSSS IMNLTYLDPL SGELKNCGEF CPLYSRATLL 360
  361 SASQNVSSSM DMITFIDNNK TDVKWTSDFQ DFAFVNELPV SSLKFVALNS YGGSVGLSGL 420
  421 ELYQDTFSTY ANDSLNEYGC SALTNDSSSS TLSSNDWYNG LTGESYIAAK YVPDQNEPIP 480
  481 RVKFYPNIIH PGHYTINMYT PGCLQDNTCS ARGIVNVTMW NQQNNTIMKT YLIYQNNDNL 540
  541 KYDQIYSGYL DFSPEIVLEY VSGIYTTNTA TVVVADQVNV ITVSLDAFNT LSDSSNAKKE 600
  601 TLLNGILQYQ KSNFTSTRLN ETKVGNTTLN LFPVKNYPKN SSLYADIYDN KLVIGGVSNR 660
  661 ISIVDLNDDF EVTSSKNQTI QGDVHGITKT NQGLLIFGDI LSSNNQSAVF LFNGSFENVF 720
  721 NQSRTVNSAL NISLANNDFI VLDNDYVVNA SSNALIRNSS SFSLSLWAAG NNGDGDVLFS 780
  781 GAVSHMQYGN LNGSVRFLNE NEIEPLNLEG GIVPYLGAYL NESATAYAYE VDSLNKIYFS 840
  841 NEVYPSWNWS SGITQMLYAD NQTLLAVSAG SSTTAELSIF DLRNLTMIAN ETLGSNARIN 900
  901 ALVNFEKNCS MLVGGDFQMT EPNCTGLCLY NYESKTWSTF LNNTIFGEIT QLSFTNSSEL 960
  961 IISGLFETKE YQSIRLGSFN LTNSTMIPLL SGSEGKLNSF TVTEDSIVAW NDTSLFIYRN1020
 1021 QEWNITSLPG NASSISSVSA IYTDIESNTL NKRGINNVNN GSILLLNGNF NISQYGYLQS1080
 1081 LLFDFQKWTP YFISETTNTS NYNPIIFINR DVSTEFNSQS PLANVNITVT SPQSTSSQPP1140
 1141 SSSASSESKS KSKKKKIGRG FVVLIGLALA LGTVSVLGIA GVILAYVFKD PEGDYKPIKP1200
 1201 RIDENEMLDT VPPEKLMKFV 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle