YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	FMP25
Protein type:	Transmembrane
Type Confidence:	0.93
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFRLFTRTS QRLPRLNWVS PIRRYAKQPQ YDEAELFAEN INHGAYKAKK RPSDEHFQWP  60
   61 EKSPDQITKE SELQWERMAK LSAVGQGILI LVVVGGLGTA YLRWPELKSW WLIKMNGGRI 120
  121 NATQEQSGQD SLEKLIRQKA KNLLREIPQV PAFQLGIDHP GVYIWGRCHS KDSLFPVRVP 180
  181 NLDGRKFRDI LLAPSDDFNT NFAIDEKGDL ISWDDLGQTK TILPDQDLTS MKYSSHFLYA 240
  241 LNKKGEILVI PIRTPDLIAS QVSSRRSKLL PWKTKLRYDW KLQTNQIFNG KEGEKRVVQF 300
  301 DAGSHHLVLL SNLGKAYCCA TGNDQKQAQV SKGQFGIPTF SQFDEFPPNN QLFEIELLNK 360
  361 FKHEGEDVVR KREIKKIACG SYHTLAIDKT GEIYAFGWNR FGQLALPISY NLEYVSFPRS 420
  421 VTHAFKPHFP GMTNWKCVDI HCDDETSFVT IRKPGSTSDH HYFAFGNGLF GELGNNTFKN 480
  481 SQCDPIKIKS DDKKLTNWSC GSHCVFTETE QENEVIAWGN NDHGQLGIGK KTMKCAKPMN 540
  541 IPEVLKPGQD TTDLDSIYNS KLHLKKEQRV VTNGNKSCLY WRV

Type	Start	End	Confidence
Cytoplasmic	1	82	0.90
Transmembrane Helix	83	102	0.89
Non-Cytoplasmic	103	583	0.98