YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YLR046C
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.80
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATHTSKRRI HRWENNELSE ENSTIIYFPA RGLMWTHFPF VLGICLEFVG YVLKIVFINS  60
   61 PSISTFIAQS VLLLIAPSLY ALSIFMLFSK MARLILMEAY MLIPAKFSTV SFVVADMIGR 120
  121 VLQAVGGGLL SSWNSRNTGR ILIIVGLFIQ IFCYTFLTFS QLFLHYKMKA TPSKIVRDSN 180
  181 EWFQYNFILL AGILLVNGRT IVRVVQFLMG LQSYIGQHEW CLYVFDTVLM FLLPLIFLAT 240
  241 FRARNLFKLQ DKSVNIQLNK LLDKESVSED

Type	Start	End	Confidence
Cytoplasmic	1	34	0.96
Transmembrane Helix	35	58	0.87
Non-Cytoplasmic	59	65	0.87
Transmembrane Helix	66	88	0.92
Cytoplasmic	89	101	0.84
Transmembrane Helix	102	124	0.80
Non-Cytoplasmic	125	140	0.82
Transmembrane Helix	141	164	0.92
Cytoplasmic	165	181	0.95
Transmembrane Helix	182	202	0.92
Non-Cytoplasmic	203	221	0.85
Transmembrane Helix	222	241	0.95
Cytoplasmic	242	270	0.95