YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YBT1
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.56
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MHHVLNSTRP DHRFWFYDDV TQYGRTKYLN YYTPLVLLIF TVLFITYNIW KHYYYYDVLH  60
   61 LKQKNPIDEL LYSSTDEDEQ SPLINNNTIT TNYVDNNCTK DALKNRHFSL EKLKSVKVNG 120
  121 EPHGTPEIVR RGFIEKSRII LEFFLVLSQV IIHSFILLHY VNKNPEFTQQ GTITGLVEWC 180
  181 ALFIIVSLRL ANVNQNFKFI NKYPGNLWSV SFINYLALFI SMILPFRSIF IHHINSPISR 240
  241 KYYISQISIN LALFLLLFFA RIRNNFAIIY KTDSWITPSP EPVTSIAGFI CWAWLDSFVW 300
  301 KAHKVSIKVK DIWGLMMQDY SFFVVKKFRY FVDHKVKRKR IFSLNLFFFF SNYLVLQCFW 360
  361 AFLGSVLSFI PTVLLKRILE YVEDQSSAPS NLAWFYVTVM FVGRILVAIC QAQALFFGRR 420
  421 VCIRMKSIII SEIYTKALRR KISTNKTKPS NEDPQEINDQ KSINGDEEST SSANLGAIIN 480
  481 LMAIDAFKVS EICGYLHSFL EAFVMTVVAL ALLYRLLGFA AIVGVLIIVA MLPLNYKLAK 540
  541 YIGDLQKKNL AVTDNRIQKL NEAFQAIRII KYFSWEENFE KDINTIRENE LSLLLMRSIV 600
  601 WSISSFLWFV TPTIVTAASF AYYIYVQGEV LTTPVAFTAL SLFTLLRDPL DRLSDMLSFV 660
  661 VQSKVSLDRV QDFLNENDTK KYDQLTIDPN GNRFAFENST ISWDKDNQDF KLKDLNIEFK 720
  721 TGKLNVVIGP TGSGKTSLLM ALLGEMYLLN GKVVVPALEP RQELIVDANG TTNSIAYCSQ 780
  781 AAWLLNDTVK NNILFNSPFN EARYKAVVEA CGLKRDFEIL KAGDLTEIGE KGITLSGGQK 840
  841 QRVSLARALY SNARHVLLDD CLSAVDSHTA SWIYDNCITG PLMEDRTCIL VSHNIALTLR 900
  901 NAELVVLLED GRVKDQGDPI DMLQKGLFGE DELVKSSILS RANSSANLAA KSSTSLSNLP 960
  961 AVKEQQVSVN NNSSHFEAKK LQKSLRTEAE RTEDGKLIKE ETKEEGVVGL DVYKWYLKIF1020
 1021 GGWKIVSFLA SLFLIAQLLY IGQSWWVRAW ASHNVIAKII PRAQRAIAFI SKKASHLIDW1080
 1081 RGSSQISMAS AENQPSSGHS TMYYLVLYLI IGFAQALLGA GKTILNFVAG INASRKIFNM1140
 1141 ILNKVLHSKI RFFDATPTGR IMNRFSKDIE AIDQELTPYI QGAFYSLIEC LSTVILITFI1200
 1201 TPQFLSVAIV VSILYYFVGY FYMAGSRELK RFESISRSPI YQHFSETLVG VTTIRAFGDE1260
 1261 GRFMQENLHK IDENNKPFFY LWVANRWLAF RIDMIGSLVI FGAGLFILFN INNLDSGMAG1320
 1321 ISLTYAISFT EGALWLVRLY SEVEMNMNSV ERVKEYMEIE QEPYNEHKEI PPPQWPQDGK1380
 1381 IEVNDLSLRY APNLPRVIKN VSFSVDAQSK IGIVGRTGAG KSTIITALFR FLEPETGHIK1440
 1441 IDNIDISGVD LQRLRRSITI IPQDPTLFSG TIKTNLDPYD EFSDRQIFEA LKRVNLISEE1500
 1501 QLQQGATRET SNEASSTNSE NVNKFLDLSS EISEGGSNLS QGQRQLMCLA RSLLRSPKII1560
 1561 LLDEATASID YSSDAKIQET IRKEFQGSTI LTIAHRLRSV IDYDKILVMD AGEVKEYDHP1620
 1621 YSLLLNKQSA FYSMCEHSGE LDILIELAKK AFVEKLNSKK D

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle