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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: YKR018C
Protein type: Transmembrane
Type Confidence: 0.62
Topology Confidence: 0.47
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKVFGFGAK EEIPELSQEE KTKAILKQAH DFEQALRAMD YVLDDNADEG LALLDESDAK  60
   61 EASDQTINAL ARGVIEFLEA TLGFEAEEMK KASATLAKAE ALSLKSRERA QKIGLKSSSL 120
  121 YPPGTVYAVT YTESCLLHAL LMIFSESMME AAKAILKLRK SYYMLQEILE TIKAANKAKK 180
  181 LKITSGSEDK ESTPATFITG GDAFNSVDIP YELTPEEQKD KDLLQFAEQI HSMRTERLSG 240
  241 AHIGNSPAIN RLRGELGLQA MEDLPEEEIT DHKVLSDDID LSQATIDEFV HSGVNLCFGI 300
  301 LQVVISLLPP AIGAVLSVVG FRGSREEGLR LVWKATKQRN VHGCIGLLAL MFYYDGPFQF 360
  361 TDDDFDIPAA VKDSSNSEDS EDEEMDGPTL LHPGKILEDA LLQSRALFPN SALWLLNEAR 420
  421 MLSGKGRLEE AVALMDSIDV SKIRMRQVKS LMIFDRAITL IHLHQYDRAA EDILSLLDIS 480
  481 DWSHAFYTYF AGCCYLENWR MCEMGLMKSD KKDEYQKKAE ELIFTSVNLL GKKTFKSKNL 540
  541 PLDRFILRKV EQFKAKKEEL GVENPLDGIA TSPVHEIAYF YNGYNRMSEE HLELTKKMLT 600
  601 EYRNPAIEAL DSDQELIKDL LVSLTLRRLG HIQEGCDILD EKVLPKFFSI QNGKVKYIKK 660
  661 TEDPWAYPTA LYERALFTWK LEGMDGLPES KEWLLRAQGY ADDYELSTRV GMKIKAAIDR 720
  721 VDHSL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle