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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: COY1
Protein type: Transmembrane
Type Confidence: 0.91
Topology Confidence: 0.61
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDTSVYSHAL DIWAKADLTN LQRELDADVI EIKDKETLSL NSRKSLATET KKFKKLEPEE  60
   61 KLNNVNKIIK QYQREIDNLT QRSKFSEKVL FDVYEKLSEA PDPQPLLQSS LEKLGKIDDS 120
  121 KELKEKISYL EDKLAKYADY ETLKSRLLDL EQSSAKTLAK RLTAKTQEIN STWEEKGRNW 180
  181 KEREADLLKQ LTNVQEQNKA LEAKISKNID IEGNGNEDGD QENNQKEVST RIAEYNLVTQ 240
  241 ELETTQARIY QLEKRNEELS GALAKATSEA EKETELHAKE LKLNQLESEN ALLSASYEQE 300
  301 RKSTSHAINE LKEQLNSVVA ESESYKSELE TVRRKLNNYS DYNKIKEELS ALKKIEFGVN 360
  361 EDDSDNDIRS EDKNDNTFES SLLSANKKLQ ATLAEYRSKS TAQEEERNEL KKSVDQLKQQ 420
  421 IATLKEANEK LETDLEKVEN VSPHFNETAS MMSGVTRQMN NRTSHKMSPT SSIIGIPEDG 480
  481 ELSGNQSTIL PIVTKQRDRF RSRNMDLEKQ LRQGNSEKGK LKLEISKLKG DNTKLYERIR 540
  541 YLQSYNNNNA PVNQSTERID VESQYSRVYD ESLHPMANFR QNELNHYKNK KLSALEKLFS 600
  601 SFAKVILQNK MTRMVFLFYC IGLHGLVFMM SMYVINISGY MTPEVGIVQS AKSSSNLNGG 660
  661 LGGAEKVAAG VGSVHGINR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle