YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CWP1
Protein type:	Globular with Signal Peptide
Type Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFSTALSVA LFALAKMVIA DSEEFGLVSI RSGSDLQYLS VYSDNGTLKL GSGSGSFEAT  60
   61 ITDDGKLKFD DDKYAVVNED GSFKEGSESD AATGFSIKDG HLNYKSSSGF YAIKDGSSYI 120
  121 FSSKQSDDAT GVAIRPTSKS GSVAADFSPS DSSSSSSASA SSASASSSTK HSSSIESVET 180
  181 STTVETSSAS SPTASVISQI TDGQIQAPNT VYEQTENAGA KAAVGMGAGA LAVAAAYLL

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	239	0.99