YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	STE24
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.48
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDLKTILDH PNIPWKLIIS GFSIAQFSFE SYLTYRQYQK LSETKLPPVL EDEIDDETFH  60
   61 KSRNYSRAKA KFSIFGDVYN LAQKLVFIKY DLFPKIWHMA VSLLNAVLPV RFHMVSTVAQ 120
  121 SLCFLGLLSS LSTLVDLPLS YYSHFVLEEK FGFNKLTVQL WITDMIKSLT LAYAIGGPIL 180
  181 YLFLKIFDKF PTDFLWYIMV FLFVVQILAM TIIPVFIMPM FNKFTPLEDG ELKKSIESLA 240
  241 DRVGFPLDKI FVIDGSKRSS HSNAYFTGLP FTSKRIVLFD TLVNSNSTDE ITAVLAHEIG 300
  301 HWQKNHIVNM VIFSQLHTFL IFSLFTSIYR NTSFYNTFGF FLEKSTGSFV DPVITKEFPI 360
  361 IIGFMLFNDL LTPLECAMQF VMSLISRTHE YQADAYAKKL GYKQNLCRAL IDLQIKNLST 420
  421 MNVDPLYSSY HYSHPTLAER LTALDYVSEK KKN

Type	Start	End	Confidence
Cytoplasmic	1	111	0.73
Transmembrane Helix	112	142	0.65
Non-Cytoplasmic	143	164	0.53
Transmembrane Helix	165	187	0.82
Cytoplasmic	188	193	0.54
Transmembrane Helix	194	218	0.90
Non-Cytoplasmic	219	306	0.55
Transmembrane Helix	307	329	0.64
Cytoplasmic	330	453	0.48