YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YJL171C
Protein type:	Globular with Signal Peptide
Type Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQSIVLSVC MFMLHTVAAS GPQSYQKLDF TNVGFTGSYV DVNKFKDITN NESCTCEVGD  60
   61 RVWFSGKNAP LADYLSVHFR GPLKLKQFAF YTSPGFTVNN SRSSSDWNRL AYYESSSKTA 120
  121 DNVTFLNHGG EASPCLGNAL SYASSNGTGS ASEATVLADG TLISSDQEYI IYSNVSCPKS 180
  181 GYDKGCGVYR SGIPAYYGYG GTTKMFLFEF EMPTETEKNS SSIGYYDLPA IWLLNDHIAR 240
  241 TSQYPTNANC SCWASGCGEY DIFEAMNGTE KNHLYSTFHT FQGIEDLGTG IQSYGYITRN 300
  301 TTGTMKGGVV FDSSGNVVSF ISDATPFNGT VSADTVNDLL AAIPENETYS SQLMSISATA 360
  361 PSTTSLSNGV RLTNMQNGVW YYILAIFTAF TQVVLI

Type	Start	End	Confidence
Signal Peptide	1	19	0.99
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	396	0.98