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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|113194839, gi...
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.76
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGDSDRWLN GTQTLDRPVH QCGCFLCLSL QFTLNSQLSG RTETTLGAIL DSRCYLEGGG  60
   61 SAESFLATED LAVGSIIGKL RINGDANAET GDINLSLREK NAPVEIHPGT KELALSVELD 120
  121 KEGVRGPSSI YVNVICIRRH STDPSFVIPV NVRVTDVNDN APQWIGTPYT LTLSEVTVPG 180
  181 TRILQGARAE DADQPGPFST VEYQVLPGPY SEYVQFLNPL EGTLVLKKAL DYEQLQNFTV 240
  241 KLRAQDQGTP PRHSDTLLRV VITDADDQNP KFQRESYSAE IPADGRPGEL RMRPEPLKAV 300
  301 DQDEGICAPI QYTIVQSQDA KYFRIHPHNG AISLLTPIGY ADVANGATLV VKATQIDNPD 360
  361 RYALTTVQLT RPGSHSDLST LAFVQKRFVM RIREDTAVGN RILALPTNKP GKHLKYVIPD 420
  421 PVNSQFFSVG SLGELVLAKP LDYEKMTKHE FQVLATDGMT NSTAELTLEV IDVNDWEPRF 480
  481 RETHYEFMVP KSQSLQSRAD SFEGVLIGKV EAADGDRNDK LELSLRGQHA GLFEIDSTGN 540
  541 IYMRPEQLQS LNESTVHLIA IATDTGVPPR STSVPVSVTM EGLTLARSGW NSNMLGMFGM 600
  601 IMGLFLMIIV ALSCYIVRSK KQGKSASSGL GLGRNRVHSQ AHSSVSSANL VTHEKLAGNG 660
  661 NGNGASVTSG GVSVLHMKHG GNITMANPMN NGLHHVASGA SSSMALGSSA ALLERERERE 720
  721 RDRERQRESY AATVRISRAS ANGQLFEEDE IEHDSLQTEN NNRKVAATGV ASGGVTTIST 780
  781 TPANAGSNLL SATDAMGSSE NNLTVYF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle