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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG5621-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MWFVKMISTE ASFPLGFILT SLLLAFPGCR GERTNVGLVY ENTDPDLEKI FHLAISKANE  60
   61 ENEDLQLHGV SVSIEPGNSF ETSKKLCKML RQNLVAVFGP TSNLAARHAM SICDAKELPF 120
  121 LDTRWDFGAQ LPTINLHPHP ATLGVALRDM VVALGWESFT IIYESGEYLP TVRELLQMYG 180
  181 TAGPTVTVRR YELDLNGNYR NVLRRIRNAD DFSFVVVGSM ATLPEFFKQA QQVGLVTSDY 240
  241 RYIIGNLDWH TMDLEPYQHA GTNITGLRLV SPDSEQVQEV AKALYESEEP FQNVSCPLTN 300
  301 SMALVYDGVQ LLAETYKHVN FRPVALSCND DSAWDKGYTL VNYMKSLTLN GLTGPIRFDY 360
  361 EGLRTDFKLE VIELAVSGMQ KIGQWSGEDG FQENRPAPAH SLEPDMRSLV NKSFVVITAI 420
  421 SEPYGMLKET SEKLEGNDQF EGFGIELIDE LSKKLGFSYT WRLQEDNKYG GIDPKTGEWN 480
  481 GMLREIIDSR ADMGITDLTM TSERESGVDF TIPFMSLGIG ILFRKPMKEP PKLFSFMSPF 540
  541 SGEVWLWLGL AYMGVSISMF VLGRLSPAEW DNPYPCIEEP TELENQFSFA NCLWFSIGAL 600
  601 LQQGSELAPK AYSTRAVAAS WWFFTLILVS SYTANLAAFL TVESLVTPIN DADDLSKNKG 660
  661 GVNYGAKIGG ATFNFFKESN YPTYQRMYEF MRDNPQYMTN TNQEGVDRVE NSNYAFLMES 720
  721 TTIEYITERR CTLTQVGALL DEKGYGIAMR KNWPYRDTLS QAVLEMQEQG LLTKMKTKWW 780
  781 QEKRGGGACS DADEDSGAVA LEISNLGGVF LVMGVGSFFG IFVSLLEMVL GVKERSDENQ 840
  841 EAPDSDASSL GFANLGGVYL VMFVGSCFGS IYGLVNCVVS VYLRARENKV SFKTELLDEI 900
  901 RFILQCSGNT KAVKYPKNSS RSNASSKSKG SSMSVDSLPE DTSEADASGK HNHGKK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle