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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: GluRIIE-PB
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.85
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFFNHFVILW SLFSIHISVN WAQYENFGGY DNYQSLESVP IGLLTDQNTE QMNIVFDHAI  60
   61 DVANQEVGTS LTSLKEEVNY GDAYQSYGKL CRMLETGIAG VFGPSSRHTA VHLMSICDAM 120
  121 DIPHIYSYMS ENAEGFNLHP HPADLAKALY SLITEFNWTR FIFLYESAEY LNILNELTTM 180
  181 LGKSGTVITV LRYDMQLNGN YKQVLRRVRK SVDNRIVVVG SSETMPEFLN QAQQVGIINE 240
  241 DYKYIIGNLD FHSFDLEEYK YSEANITGLR LFSPEKMAVK ELLMKLGYPT DQDEFRNGSC 300
  301 PITVEMALTY DAVQLFAQTL KNLPFKPMPQ NCSQRTESVR DDGSSFKNYM RTLRLTDRLL 360
  361 TGPIYFEGNV RKGYHLDVIE LQPSGIVKVG TWDEDRQYRP QRLAPTTAQF DSVDNSLANK 420
  421 TFIILLSVPN KPYAQLVETY KQLEGNSQYE GYGVDLIKEL ADKLGFNFTF VNGGNDYGSY 480
  481 NKSTNESTGM LREIMTGRAD LAITDLTITS EREQALDFTI PFMNLGIAIL YLKPQKATPE 540
  541 LFTFMDPFSE EVWWFLGFSF LGVSLSFFIL GRLSPSEWDN PYPCIEEPEE LENQFTLGNS 600
  601 IWFTTGALLQ QGSEIGPKAL STRTVASFWW FFTLIVVSSY TANLAAFLTI EKPQSLINSV 660
  661 DDLADNKDGV VYGAKKTGST RNFFMTSAEE RYKKMNKFMS ENPQYLTEDN MEGVNRVKTN 720
  721 THYAFLMEST SIEYNTKREC NLKKIGDALD EKGYGIAMRK DWPHRGKFNN ALLELQEQGV 780
  781 LEKMKNKWWN EVGTGICATK EDAPDATPLD MNNLEGVFFV LLVGSCCALL YGIISWVLFV 840
  841 MKKAHHYRVP LRDALKEEFQ FVIDFNNYVR VLKNSASIYS RSRQSSMSVA SVAQESQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle