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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CG18208-PA
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.42
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDYSRLNANI NTGNISTDDF LAVFSTGKPD NATLNPPLLS VDGQLTLPPG SGYVNVNDTI  60
   61 FFLNGSFYNS SLQLAAGFYN QSSASGATSG NLTNPNHTEV HWDGRYPSGY TLTHIVIASI 120
  121 IVTILMIIIV VGNMLVIIAI ATEKSLKNIQ NWFIASLAVA DFFLGLIIMP FSLANELMGY 180
  181 WIFGSWWCDI HSAMDVLLCT ASIMNLCLIS LDRYWSITKA VDYLKSRTPA RAAVMITAVW 240
  241 IMSALICIPP LLGWKVKMPE GPLPKCELSE DIGYVLYSAL GSFYIPSCIM VFVYIRIYFA 300
  301 AKARARRGIK KHPRKTNNEQ VTSFTTAKKG TIPMPSSSGV SALQLHQQRQ IATIETPPNS 360
  361 ASLPMQIPTV TMDLASDIST SEAGELEAVA AQTVLAYANP NGAGTNSVTV VSSGNGGPGA 420
  421 SGVPPSSPKE TLQVSTIATG RVGLNVPVPP SMGSNSSINV LNNNNGTVAM DGGATAAGGG 480
  481 NGSAVATPGG LQQTGGNELR VSPIAGRCRA LSVGVDTDMV SEFDPSSSDS GVVSRCAVVK 540
  541 PLKFRLCQPI FGRKSSNQQR RNEAKAAAKN QQSSGVASKN QQQQQQQQQQ QVVKSELEPA 600
  601 IPKTPKPRDP EKEKRRIARK KEKRATLILG LIMGSFIACW LPFFFLYILV PACSSHCNIP 660
  661 ESAFAVAFWL GYMNSALNPA IYTIFNKDFR RAFRRILFK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle