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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NIT2
Protein type: Globular with Signal Peptide
Type Confidence: 0.72
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSKLKRVAV AQLCSSADLT KNLKVVKELI SEAIQKKADV VFLPEASDYL SQNPLHSRYL  60
   61 AQKSPKFIRQ LQSSITDLVR DNSRNIDVSI GVHLPPSEQD LLEGNDRVRN VLLYIDHEGK 120
  121 ILQEYQKLHL FDVDVPNGPI LKESKSVQPG KAIPDIIESP LGKLGSAICY DIRFPEFSLK 180
  181 LRSMGAEILC FPSAFTIKTG EAHWELLGRA RAVDTQCYVL MPGQVGMHDL SDPEWEKQSH 240
  241 MSALEKSSRR ESWGHSMVID PWGKIIAHAD PSTVGPQLIL ADLDRELLQE IRNKMPLWNQ 300
  301 RRDDLFH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle