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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: JEM1_YEAST
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MILISGYCLL VYSVILPVLI SASKLCDLAE LQRLNKNLKV DTESLPKYQW IAGQLEQNCM  60
   61 TADPASENMS DVIQLANQIY YKIGLIQLSN DQHLRAINTF EKIVFNETYK GSFGKLAEKR 120
  121 LQELYVDFGM WDKVHQKDDQ YAKYLSLNET IRNKISSKDV SVEEDISELL RITPYDVNVL 180
  181 STHIDVLFHK LAEEIDVSLA AAIILDYETI LDKHLASLSI DTRLSIHYVI SVLQTFVLNS 240
  241 DASFNIRKCL SIDMDYDKCK KLSLTISKLN KVNPSKRQIL DPATYAFENK KFRSWDRIIE 300
  301 FYLKDKKPFI TPMKILNKDT NFKNNYFFLE EIIKQLIEDV QLSRPLAKNL FEDPPITDGF 360
  361 VKPKSYYHTD YLVYIDSILC QASSMSPDVK RAKLAAPFCK KSLRHSLTLE TWKHYQDAKS 420
  421 EQKPLPETVL SDVWNSNPHL LMYMVNSILN KSRSKPHSQF KKQLYDQINK FFQDNGLSES 480
  481 TNPYVMKNFR LLQKQLQTYK EHKHRNFNQQ YFQQQQQQQQ HQRHQAPPAA PNYDPKKDYY 540
  541 KILGVSPSAS SKEIRKAYLN LTKKYHPDKI KANHNDKQES IHETMSQINE AYETLSDDDK 600
  601 RKEYDLSRSN PRRNTFPQGP RQNNMFKNPG SGFPFGNGFK MNFGL

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle