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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: NUP82
Protein type: Globular with Signal Peptide
Type Confidence: 0.97
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSSRLSAL PIFQASLSAS QSPRYIFSSQ NGTRIVFIQD NIIRWYNVLT DSLYHSLNFS  60
   61 RHLVLDDTFH VISSTSGDLL CLFNDNEIFV MEVPWGYSNV EDVSIQDAFQ IFHYSIDEEE 120
  121 VGPKSSIKKV LFHPKSYRDS CIVVLKEDDT ITMFDILNSQ EKPIVLNKPN NSFGLDARVN 180
  181 DITDLEFSKD GLTLYCLNTT EGGDIFAFYP FLPSVLLLNE KDLNLILNKS LVMYESLDST 240
  241 TDVIVKRNVI KQLQFVSKLH ENWNSRFGKV DIQKEYRLAK VQGPFTINPF PGELYDYTAT 300
  301 NIATILIDNG QNEIVCVSFD DGSLILLFKD LEMSMSWDVD NYVYNNSLVL IERVKLQREI 360
  361 KSLITLPEQL GKLYVISDNI IQQVNFMSWA STLSKCINES DLNPLAGLKF ESKLEDIATI 420
  421 ERIPNLAYIN WNDQSNLALM SNKTLTFQNI SSDMKPQSTA AETSISTEKS DTVGDGFKMS 480
  481 FTQPINEILI LNDNFQKACI SPCERIIPSA DRQIPLKNEA SENQLEIFTD ISKEFLQRIV 540
  541 KAQTLGVSIH NRIHEQQFEL TRQLQSTCKI ISKDDDLRRK FEAQNKKWDA QLSRQSELME 600
  601 RFSKLSKKLS QIAESNKFKE KKISHGEMKW FKEIRNQILQ FNSFVHSQKS LQQDLSYLKS 660
  661 ELTRIEAETI KVDKKSQNEW DELRKMLEID SKIIKECNEE LLQVSQEFTT KTQ

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle