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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: IRC8_YEAST
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.50
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MCHNSVRSGN KAGFLGIKFG SALLSIATGA IAIALLCKFH DHEAVLIVIV CSTLLYGIPS  60
   61 LISFITETVF APSKFHIGYF YNVLNFALPL ITMGCTVDYF HNTLRSPISV QSESHRVYIT 120
  121 TLDSLLIFTL FINGIQLGFF LKDGNANNFG SSSNNISTDQ YDKEANAVEN GRFVPLKNSS 180
  181 QTLTPDLELL HGSPKSMNGV AWLINELSTN SNTNANKTIS SDENSNSSVI RHKLGPISTS 240
  241 KCPKKPSHSH FSKLKKYNSF FLGPKENRYK RNTQQATKVP TEKKSNHRSS QYVSRLSTIS 300
  301 DISKSFLNFL ALNEKNGNST STARTPSEGR VSIIINEGNN TLKYKTPHDS HTIDSPNLEL 360
  361 EREAIGRINS ALLPACLRVT DKMISPQQST QNEDSYQATP LIPQVEVDDD FYVGDILMTN 420
  421 ELQDIPQVPR ISSDIEDDFE QQYTKHVDLP ARVTLEMWEK DQEKILQKVT TNRDKSKLLP 480
  481 PFRFTSESDM DPSTSTELEV ELHAQNNFSF PFKSAGLQIA TSDQFNQQEF KTSDTISELD 540
  541 EYLHDPSIQE EDASQLIESS LNQNNLSSTT IDNGPKDMSR FSTRHSPTKS IISMISGSGS 600
  601 VKHQHSHSTL SNFFTGHSRN NSQINQLLQG SSSNMMSNTS PHSSPTKSLR MRFGKKLSLS 660
  661 NISDTMSPYE GSTTDPINYS FGHGHNKNQS IDFSYVRTLQ SSHSPTKSTS GNSRRDSLNN 720
  721 DRTQSTVNER ALRTASTLFY LQHNNATCTL NGEEPVLDTP QSIQSSSSGS EQESAGSGSG 780
  781 YPEVVFSEYD REKWNVLRNL KEIAPEKTIE SGPVEELVSP SK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle