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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0306986
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCVFEAAKE QPHKPRSRQL RRNQCRGKAE KAAAGTRGKV AVRGNNDKPA EDIKIKDNYQ  60
   61 QNHKTQTETQ TEVAAVVAIA TDAGAETETE TEAEAQKEPA TGPEHLKAAA QVLLTIRQAR 120
  121 QENNKHSSSQ VAETHKDEGE DALARQGSIV DTAAGRIGID IAATTIQVAE RHEDGQHWQQ 180
  181 HNVRRRRRQP DPAAHPASIT KLSAISLHFH ALAALAKTLQ KHEDLSPVQD RQPLAYRAWQ 240
  241 EHPYAETQMP ATMSAAIIAN VGATAAATSA AAFQYLGQHY KHYSQSISFY AASSVLLMLC 300
  301 YLTTASTAAA TQSETGALDK HPIHGIDWSK FDESSSDKEI LDLLLEKKRY DKRLLPPVNG 360
  361 TLTVNVNVLL LSLASPDESS LKYEVEFLLN QQWNDPRLQY GNKSHYDFLN ALHHHDSIWT 420
  421 PDTYFIMHGD FKDPIIPMHF ALRIFRNGTI TYAMRRHLIL SCQGSLHIFP FDDPKCSFSM 480
  481 ESISYEEAQI KYVWKNDEDT LRKSPSLTTL NAYLIKNQTT ACDQNSWRGN YSCLQVELTF 540
  541 TRDRAYYFTT VFIPGIILVT SSFITFWLEW NAVPARVMIG VTTMLNFFTT SNGFRSTLPV 600
  601 VSNLTAMNVW DGVCMCFIYA SLLEFVCVNY VGRKRPLHNV VYRPGENPVT QPGEKRQNAG 660
  661 APNEIVACTT CGGSNSPCTH SANNGCATET CFVQVRKKEP PHPIRVAKTI DVIARITFPT 720
  721 AYAIFLIFFF VHYKGFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle