YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FBpp0306988
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.75
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGCVFEAAKE QPHKPRSRQL RRNQCRGKAE KAAAGTRGKV AVRGNNDKPA EDIKIKDNYQ  60
   61 QNHKTQTETQ TEVAAVVAIA TDAGAETETE TEAEAQKEPA TGPEHLKAAA QVLLTIRQAR 120
  121 QENNKHSSSQ VAETHKDEGE DALARQGSIV DTAAGRIGID IAATTIQVAE RHEDGQHWQQ 180
  181 HNVRRRRRQP DPAAHPASIT KLSAISLHFH ALAALAKTLQ KHEDLSPVQD RQPLAYRAWQ 240
  241 EHPYAETQMP ATMSAAIIAN VGATAAATSA AAFQYLGQHY KHYSQSISFY AASSVLLMLC 300
  301 YLTTASTAAA TQSETGALDK HPIHGIDWSK FDESSSDKEI LDLLLEKKRY DKRLLPPVND 360
  361 EDFCCGLQSP DMATNQNARR PHNRGTLTVN VNVLLLSLAS PDESSLKYEV EFLLNQQWND 420
  421 PRLQYGNKSH YDFLNALHHH DSIWTPDTYF IMHGDFKDPI IPMHFALRIF RNGTITYAMR 480
  481 RHLILSCQGS LHIFPFDDPK CSFSMESISY EEAQIKYVWK NDEDTLRKSP SLTTLNAYLI 540
  541 KNQTTACDQN SWRGNYSCLR VDLIFTRDRA FYFTTVFIPG IILVTSSFIT FWLEWNAVPA 600
  601 RSMIGVTTML NFFTTSNGFR STLPVVSNLT AMNVWDGVCM CFIYASLLEF VCVNYVGRKR 660
  661 PLHNVVYRPG ENPVTQRLPA VLSRIGVILA SPLPGEKRQN AGAPNEIVAC TTCGGSNSPC 720
  721 THSANNGCAT ETCFVQVRKK EPPHPIRVAK TIDVIARITF PTAYAIFLIF FFVHYKGFS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle