YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	YIL170W
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.52
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Predicted Protein Segments [Hide List]:

Type	Start	End	Confidence
Non-Cytoplasmic	1	4	0.52
Transmembrane Helix	5	23	0.60
Cytoplasmic	24	29	0.73
Transmembrane Helix	30	50	0.92
Non-Cytoplasmic	51	56	0.78
Transmembrane Helix	57	78	0.94
Cytoplasmic	79	89	0.74
Transmembrane Helix	90	110	0.88
Non-Cytoplasmic	111	120	0.71
Transmembrane Helix	121	142	0.91
Cytoplasmic	143	206	0.86
Transmembrane Helix	207	225	0.75
Non-Cytoplasmic	226	245	0.86
Transmembrane Helix	246	267	0.89
Cytoplasmic	268	274	0.92
Transmembrane Helix	275	296	0.94
Non-Cytoplasmic	297	317	0.88
Transmembrane Helix	318	340	0.92
Cytoplasmic	341	352	0.85
Transmembrane Helix	353	374	0.89
Non-Cytoplasmic	375	379	0.78
Transmembrane Helix	380	400	0.92
Cytoplasmic	401	457	0.98

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGLIVSIFNI GCAIGGIVLS KVGDIYGRRI GLITVTAIYV VGILIQITSI NKWYQYFIGR  60
   61 IISGIGVGGI AVLSPMLISE VAPKHIRGTL VQLYQLMGTM GIFLGYCTNY GTKNYHNATQ 120
  121 WRVGLGLCFA WATFMVSGMM FVPESPRYLI EVGKDEEAKH SLSKSNKVSV DDPALLAEYD 180
  181 TIKAGIEIEK LAGNASWSEL LSTKTKVFQR VLMGVIIQSL QQLTGDNYFF YYGTTIFKSV 240
  241 GLKDSFQTSI IIGVVNFFSS FIAVYTIERF GRRTCLLWGA ASMLCCFAVF ASVGVTKLWP 300
  301 QGSSHQDITS QGAGNCMIVF TMFFIFSFAT TWAGGCFVIV SETFPLRAKS RGMAIATAAN 360
  361 WMWGFLISFF TPFITGAINF YYGYVFLGCL VFAYFYVFFF VPETKGLTLE EVNTMWLEGV 420
  421 PAWKSASWVP PERRTADYDA DAIDHDNRPI YKRFFSS